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  1. SonarQube
  2. SONAR-8178

Server startup fails if a test can't be indexed

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      When a test can't be indexed at startup, then log should mention the test ID so that the raw data can be debugged.
      Moreover as , the test error should be ignored and should not break the startup.

      See http://stackoverflow.com/questions/39691455/illegalstateexception-when-migrating-databases-from-sonarqube-5-3-to-5-6-2-and

      2016.09.25 12:46:31 INFO  web[DbMigration] ==  UpdateUsersExternalIdentityWhenEmpty: migrating ===========================
      2016.09.25 12:46:31 INFO  web[o.s.d.v.MassUpdate] 0 users processed (0 items/sec)
      2016.09.25 12:46:31 INFO  web[DbMigration] ==  UpdateUsersExternalIdentityWhenEmpty: migrated (0.0110s) ==================
      2016.09.25 12:46:31 INFO  web[DbMigration] 
      2016.09.25 12:46:32 INFO  web[o.s.s.p.UpdateCenterClient] Update center: https://update.sonarsource.org/update-center.properties (no proxy)
      2016.09.25 12:46:34 INFO  web[o.s.s.n.NotificationService] Notification service started (delay 60 sec.)
      2016.09.25 12:46:34 INFO  web[o.s.d.c.MysqlCharsetHandler] Repair case-insensitive database columns
      2016.09.25 12:46:34 INFO  web[o.s.s.s.RegisterMetrics] Register metrics
      2016.09.25 12:46:34 INFO  web[o.s.s.r.RegisterRules] Register rules
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1318
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:CycleBetweenPackages
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findsecbugs:WEAK_MESSAGE_DIGEST
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1724
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1701
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:SC_SUSPICIOUS_COMPARATOR_RETURN_VALUES
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:UOE_USE_OBJECT_EQUALS
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_INEXACT_DOUBLE
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1294
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_BOOLEAN_ASSERT
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:SMA_STUTTERED_METHOD_ARGUMENTS
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_IMPOSSIBLE_NULL
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:SKIPPED_CLASS_TOO_BIG
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findsecbugs:XSS_JSP_PRINT
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:LG_LOST_LOGGER_DUE_TO_WEAK_REFERENCE
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:StringEqualityComparisonCheck
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_USE_ASSERT_EQUALS
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:OBL_UNSATISFIED_OBLIGATION
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_ASSERT_USED
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:OBL_UNSATISFIED_OBLIGATION_EXCEPTION_EDGE
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:LowerCaseLongSuffixCheck
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:RV_RETURN_VALUE_IGNORED2
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule fb-contrib:JAO_JUNIT_ASSERTION_ODDITIES_ACTUAL_CONSTANT
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1873
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:UnusedProtectedMethod
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule squid:S1848
      2016.09.25 12:46:40 INFO  web[o.s.s.r.RegisterRules] Disable rule findbugs:XSS_REQUEST_PARAMETER_TO_JSP_WRITER
      2016.09.25 12:46:45 INFO  web[o.s.s.q.RegisterQualityProfiles] Register quality profiles
      2016.09.25 12:46:50 INFO  ce[o.s.c.a.WebServerWatcherImpl] Still waiting for WebServer...
      2016.09.25 12:46:51 INFO  web[o.s.s.q.RegisterQualityProfiles] Register profile {lang=cs, name=Sonar way}
      2016.09.25 12:46:53 INFO  web[o.s.s.q.RegisterQualityProfiles] Set default cs profile: Sonar way
      2016.09.25 12:46:53 INFO  web[o.s.s.q.RegisterQualityProfiles] Register profile {lang=java, name=FindBugs + FB-Contrib}
      2016.09.25 12:47:03 INFO  web[o.s.s.q.RegisterQualityProfiles] Register profile {lang=jsp, name=FindBugs Security JSP}
      2016.09.25 12:47:03 INFO  web[o.s.s.q.RegisterQualityProfiles] Set default jsp profile: FindBugs Security JSP
      2016.09.25 12:47:04 INFO  web[o.s.s.s.RegisterNewMeasureFilters] Register measure filters
      2016.09.25 12:47:04 INFO  web[o.s.s.s.RegisterDashboards] Register dashboards
      2016.09.25 12:47:04 INFO  web[o.s.s.s.RegisterPermissionTemplates] Register permission templates
      2016.09.25 12:47:04 INFO  web[o.s.s.s.RenameDeprecatedPropertyKeys] Rename deprecated property keys
      2016.09.25 12:47:04 INFO  web[o.s.s.p.MasterServletFilter] Initializing servlet filter org.sonar.server.authentication.InitFilter@97f102c [pattern=/sessions/init/*]
      2016.09.25 12:47:04 INFO  web[o.s.s.p.MasterServletFilter] Initializing servlet filter org.sonar.server.authentication.OAuth2CallbackFilter@7ba0646e [pattern=/oauth2/callback/*]
      2016.09.25 12:47:04 INFO  web[o.s.s.e.IndexerStartupTask] Index activities
      2016.09.25 12:47:05 INFO  web[o.s.s.e.IndexerStartupTask] Index issues
      2016.09.25 12:47:07 INFO  web[o.s.s.e.IndexerStartupTask] Index tests
      2016.09.25 12:47:07 INFO  web[o.s.s.d.m.PlatformDatabaseMigration] DB migration failed | time=45804ms
      2016.09.25 12:47:07 ERROR web[o.s.s.d.m.PlatformDatabaseMigration] DB Migration or container restart failed. Process ended with an exception
      java.lang.RuntimeException: java.util.concurrent.ExecutionException: java.lang.IllegalStateException: Fail to decompress and deserialize source data
          at com.google.common.base.Throwables.propagate(Throwables.java:160) ~[guava-17.0.jar:na]
          at org.sonar.server.es.BaseIndexer.index(BaseIndexer.java:82) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.es.BaseIndexer.index(BaseIndexer.java:88) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.es.IndexerStartupTask.execute(IndexerStartupTask.java:71) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.platform.platformlevel.PlatformLevelStartup$1.doPrivileged(PlatformLevelStartup.java:81) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.user.DoPrivileged.execute(DoPrivileged.java:44) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.platform.platformlevel.PlatformLevelStartup.start(PlatformLevelStartup.java:77) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.platform.Platform.executeStartupTasks(Platform.java:201) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.platform.Platform.doStart(Platform.java:114) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.platform.Platform.doStart(Platform.java:99) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.db.migrations.PlatformDatabaseMigration.doRestartContainer(PlatformDatabaseMigration.java:138) [sonar-server-5.6.2.jar:na]
          at org.sonar.server.db.migrations.PlatformDatabaseMigration.doDatabaseMigration(PlatformDatabaseMigration.java:114) [sonar-server-5.6.2.jar:na]
          at org.sonar.server.db.migrations.PlatformDatabaseMigration.access$000(PlatformDatabaseMigration.java:37) [sonar-server-5.6.2.jar:na]
          at org.sonar.server.db.migrations.PlatformDatabaseMigration$1.run(PlatformDatabaseMigration.java:101) [sonar-server-5.6.2.jar:na]
          at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) [na:1.8.0_92]
          at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) [na:1.8.0_92]
          at java.lang.Thread.run(Thread.java:745) [na:1.8.0_92]
      Caused by: java.util.concurrent.ExecutionException: java.lang.IllegalStateException: Fail to decompress and deserialize source data
          at java.util.concurrent.FutureTask.report(FutureTask.java:122) ~[na:1.8.0_92]
          at java.util.concurrent.FutureTask.get(FutureTask.java:192) ~[na:1.8.0_92]
          at com.google.common.util.concurrent.Uninterruptibles.getUninterruptibly(Uninterruptibles.java:135) ~[guava-17.0.jar:na]
          at org.sonar.server.es.BaseIndexer.index(BaseIndexer.java:80) ~[sonar-server-5.6.2.jar:na]
          ... 15 common frames omitted
      Caused by: java.lang.IllegalStateException: Fail to decompress and deserialize source data
          at org.sonar.db.source.FileSourceDto.decodeTestData(FileSourceDto.java:167) ~[sonar-db-5.6.2.jar:na]
          at org.sonar.server.test.index.TestResultSetIterator.read(TestResultSetIterator.java:79) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.test.index.TestResultSetIterator.read(TestResultSetIterator.java:60) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.db.ResultSetIterator.next(ResultSetIterator.java:82) ~[sonar-db-5.6.2.jar:na]
          at org.sonar.server.test.index.TestIndexer.doIndex(TestIndexer.java:93) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.test.index.TestIndexer.doIndex(TestIndexer.java:80) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.test.index.TestIndexer.doIndex(TestIndexer.java:70) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.es.BaseIndexer$2.index(BaseIndexer.java:91) ~[sonar-server-5.6.2.jar:na]
          at org.sonar.server.es.BaseIndexer$1.run(BaseIndexer.java:73) ~[sonar-server-5.6.2.jar:na]
          at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) ~[na:1.8.0_92]
          at java.util.concurrent.FutureTask.run(FutureTask.java:266) ~[na:1.8.0_92]
          ... 3 common frames omitted
      Caused by: com.google.protobuf.InvalidProtocolBufferException: Stream is corrupted
          at com.google.protobuf.AbstractParser.parsePartialDelimitedFrom(AbstractParser.java:230) ~[protobuf-java-3.0.0-beta-2.jar:na]
          at com.google.protobuf.AbstractParser.parseDelimitedFrom(AbstractParser.java:246) ~[protobuf-java-3.0.0-beta-2.jar:na]
          at com.google.protobuf.AbstractParser.parseDelimitedFrom(AbstractParser.java:251) ~[protobuf-java-3.0.0-beta-2.jar:na]
          at com.google.protobuf.AbstractParser.parseDelimitedFrom(AbstractParser.java:49) ~[protobuf-java-3.0.0-beta-2.jar:na]
          at org.sonar.db.protobuf.DbFileSources$Test.parseDelimitedFrom(DbFileSources.java:4267) ~[sonar-db-5.6.2.jar:na]
          at org.sonar.db.source.FileSourceDto.decodeTestData(FileSourceDto.java:160) ~[sonar-db-5.6.2.jar:na]
          ... 13 common frames omitted
      

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            Assignee:
            simon.brandhof Simon Brandhof (Inactive)
            Reporter:
            simon.brandhof Simon Brandhof (Inactive)
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